rs35333334
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
Make rs35333334(C;T) |
Make rs35333334(T;T) |
Reference | GRCh38 38.1/142 |
Chromosome | 12 |
Position | 101749181 |
Gene | CHPT1, GNPTAB |
is a | snp |
is | mentioned by |
dbSNP | rs35333334 |
dbSNP (classic) | rs35333334 |
ClinGen | rs35333334 |
ebi | rs35333334 |
HLI | rs35333334 |
Exac | rs35333334 |
Gnomad | rs35333334 |
Varsome | rs35333334 |
LitVar | rs35333334 |
Map | rs35333334 |
PheGenI | rs35333334 |
Biobank | rs35333334 |
1000 genomes | rs35333334 |
hgdp | rs35333334 |
ensembl | rs35333334 |
geneview | rs35333334 |
scholar | rs35333334 |
rs35333334 | |
pharmgkb | rs35333334 |
gwascentral | rs35333334 |
openSNP | rs35333334 |
23andMe | rs35333334 |
SNPshot | rs35333334 |
SNPdbe | rs35333334 |
MSV3d | rs35333334 |
GWAS Ctlg | rs35333334 |
Max Magnitude | 0 |
ClinVar | |
---|---|
Risk | rs35333334(T;T) |
Alt | rs35333334(T;T) |
Reference | Rs35333334(C;C) |
Significance | Pathogenic |
Disease | Pseudo-Hurler polydystrophy I cell disease |
Variation | info |
Gene | GNPTAB LOC101929005 |
CLNDBN | Pseudo-Hurler polydystrophy I cell disease |
Reversed | 1 |
HGVS | NC_000012.11:g.102142959G>A |
CLNSRC | ClinVar GeneReviews |
CLNACC | RCV000031986.2, RCV000032344.1, |
[PMID 16200072] Mucolipidosis II is caused by mutations in GNPTA encoding the alpha/beta GlcNAc-1-phosphotransferase.
[PMID 16465621] Mucolipidosis II (I-cell disease) and mucolipidosis IIIA (classical pseudo-hurler polydystrophy) are caused by mutations in the GlcNAc-phosphotransferase alpha / beta -subunits precursor gene.
[PMID 16630736] When Mucolipidosis III meets Mucolipidosis II: GNPTA gene mutations in 24 patients.