rs3731249
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
Make rs3731249(A;A) |
Make rs3731249(A;G) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 9 |
Position | 21970917 |
Gene | CDKN2A |
is a | snp |
is | mentioned by |
dbSNP | rs3731249 |
dbSNP (classic) | rs3731249 |
ClinGen | rs3731249 |
ebi | rs3731249 |
HLI | rs3731249 |
Exac | rs3731249 |
Gnomad | rs3731249 |
Varsome | rs3731249 |
LitVar | rs3731249 |
Map | rs3731249 |
PheGenI | rs3731249 |
Biobank | rs3731249 |
1000 genomes | rs3731249 |
hgdp | rs3731249 |
ensembl | rs3731249 |
geneview | rs3731249 |
scholar | rs3731249 |
rs3731249 | |
pharmgkb | rs3731249 |
gwascentral | rs3731249 |
openSNP | rs3731249 |
23andMe | rs3731249 |
SNPshot | rs3731249 |
SNPdbe | rs3731249 |
MSV3d | rs3731249 |
GWAS Ctlg | rs3731249 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
[PMID 26104880] Inherited coding variants at the CDKN2A locus influence susceptibility to acute lymphoblastic leukaemia in children
ClinVar | |
---|---|
Risk | rs3731249(A;A) rs3731249(T;T) |
Alt | rs3731249(A;A) rs3731249(T;T) |
Reference | Rs3731249(G;G) |
Significance | Non-pathogenic |
Disease | Hereditary cutaneous melanoma not provided not specified Hereditary cancer-predisposing syndrome Melanoma-pancreatic cancer syndrome |
Variation | info |
Gene | CDKN2A |
CLNDBN | Hereditary cutaneous melanoma not provided not specified Hereditary cancer-predisposing syndrome Melanoma-pancreatic cancer syndrome |
Reversed | 1 |
HGVS | NC_000009.11:g.21970916C>A; NC_000009.11:g.21970916C>T |
CLNSRC | HGMD UniProtKB (protein) |
CLNACC | RCV000466987.1, RCV000034482.3, RCV000078114.6, RCV000119155.4, RCV000157755.3, RCV000412408.1, |
[PMID 26463672] The 9p21.3 risk of childhood acute lymphoblastic leukaemia is explained by a rare high-impact variant in CDKN2A
[PMID 26527286] A Heritable Missense Polymorphism in CDKN2A Confers Strong Risk of Childhood Acute Lymphoblastic Leukemia and Is Preferentially Selected during Clonal Evolution