rs3742207
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
Make rs3742207(A;C) |
Make rs3742207(C;C) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 110166251 |
Gene | COL4A1 |
is a | snp |
is | mentioned by |
dbSNP | rs3742207 |
dbSNP (classic) | rs3742207 |
ClinGen | rs3742207 |
ebi | rs3742207 |
HLI | rs3742207 |
Exac | rs3742207 |
Gnomad | rs3742207 |
Varsome | rs3742207 |
LitVar | rs3742207 |
Map | rs3742207 |
PheGenI | rs3742207 |
Biobank | rs3742207 |
1000 genomes | rs3742207 |
hgdp | rs3742207 |
ensembl | rs3742207 |
geneview | rs3742207 |
scholar | rs3742207 |
rs3742207 | |
pharmgkb | rs3742207 |
gwascentral | rs3742207 |
openSNP | rs3742207 |
23andMe | rs3742207 |
SNPshot | rs3742207 |
SNPdbe | rs3742207 |
MSV3d | rs3742207 |
GWAS Ctlg | rs3742207 |
GMAF | 0.2925 |
Max Magnitude | 0 |
? | (A;A) (A;C) (C;C) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 20031579] |
Trait | Arterial stiffness |
Title | COL4A1 Is Associated With Arterial Stiffness by Genome-Wide Association Scan |
Risk Allele | C |
P-val | 5E-8 |
Odds Ratio | 21.00 [11.79-30.21] cm/s increase |
[PMID 19679263] Using new tools to define the genetic underpinnings of risky traits associated with coronary artery disease: the SardiNIA study.
ClinVar | |
---|---|
Risk | rs3742207(C;C) rs3742207(T;T) |
Alt | rs3742207(C;C) rs3742207(T;T) |
Reference | Rs3742207(A;A) |
Significance | Non-pathogenic |
Disease | not specified Porencephaly Angiopathy Brain small vessel disease with hemorrhage |
Variation | info |
Gene | COL4A1 |
CLNDBN | not specified Porencephaly Angiopathy, hereditary, with nephropathy, aneurysms, and muscle cramps Brain small vessel disease with hemorrhage |
Reversed | 1 |
HGVS | NC_000013.10:g.110818598T>G |
CLNSRC | |
CLNACC | RCV000178573.2, RCV000269625.1, RCV000326846.1, RCV000388359.1, |
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 13
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d