rs386833967
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;AACA) | 3 | Carrier of a mutation for neuronal ceroid-lipofuscinoses mutation |
(AACA;AACA) | 0 | common in clinvar |
(ACAA;ACAA) | 0 | common in clinvar |
(D;I) | If from Ancestry DNA, likely to be a miscall |
Make rs386833967(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 77000848 |
Gene | CLN5, FBXL3 |
is a | snp |
is | mentioned by |
dbSNP | rs386833967 |
dbSNP (classic) | rs386833967 |
ClinGen | rs386833967 |
ebi | rs386833967 |
HLI | rs386833967 |
Exac | rs386833967 |
Gnomad | rs386833967 |
Varsome | rs386833967 |
LitVar | rs386833967 |
Map | rs386833967 |
PheGenI | rs386833967 |
Biobank | rs386833967 |
1000 genomes | rs386833967 |
hgdp | rs386833967 |
ensembl | rs386833967 |
geneview | rs386833967 |
scholar | rs386833967 |
rs386833967 | |
pharmgkb | rs386833967 |
gwascentral | rs386833967 |
openSNP | rs386833967 |
23andMe | rs386833967 |
SNPshot | rs386833967 |
SNPdbe | rs386833967 |
MSV3d | rs386833967 |
GWAS Ctlg | rs386833967 |
Max Magnitude | 3 |
rs386833967, also known as c.1103_1106delAACA and p.Lys368Serfs, represents a very rare deletion mutation in the CLN5 gene on chromosome 13.
The variant (deletion) allele is considered pathogenic for ceroid lipofuscinosis neuronal 5, a recessively inherited condition, according to ClinVar.
ClinVar | |
---|---|
Risk | rs386833967(-;-) |
Alt | rs386833967(-;-) |
Reference | Rs386833967(ACAA;ACAA) |
Significance | Probable-Pathogenic |
Disease | Ceroid lipofuscinosis neuronal 5 |
Variation | info |
Gene | CLN5 |
CLNDBN | Ceroid lipofuscinosis neuronal 5 |
Reversed | 0 |
HGVS | NC_000013.10:g.77574983_77574986delAACA |
CLNSRC | ClinVar |
CLNACC | RCV000049942.1, |
[PMID 21990111] Update of the mutation spectrum and clinical correlations of over 360 mutations in eight genes that underlie the neuronal ceroid lipofuscinoses.