rs397507333
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;AGAA) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(AAGA;AAGA) | 0 | common in clinvar |
(AGAA;AGAA) | 0 | common in clinvar |
Make rs397507333(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32338770 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs397507333 |
dbSNP (classic) | rs397507333 |
ClinGen | rs397507333 |
ebi | rs397507333 |
HLI | rs397507333 |
Exac | rs397507333 |
Gnomad | rs397507333 |
Varsome | rs397507333 |
LitVar | rs397507333 |
Map | rs397507333 |
PheGenI | rs397507333 |
Biobank | rs397507333 |
1000 genomes | rs397507333 |
hgdp | rs397507333 |
ensembl | rs397507333 |
geneview | rs397507333 |
scholar | rs397507333 |
rs397507333 | |
pharmgkb | rs397507333 |
gwascentral | rs397507333 |
openSNP | rs397507333 |
23andMe | rs397507333 |
SNPshot | rs397507333 |
SNPdbe | rs397507333 |
MSV3d | rs397507333 |
GWAS Ctlg | rs397507333 |
Max Magnitude | 6 |
c.4415_4418delAGAA (p.Lys1472Thrfs)
Note: the 23andMe probe (i5009143) corresponding to this genotype is unreliable (prone to false results).
ClinVar | |
---|---|
Risk | rs397507333(-;-) Rs397507333(AAGA;AAGA) |
Alt | rs397507333(-;-) Rs397507333(AAGA;AAGA) |
Reference | Rs397507333(AGAA;AGAA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome not provided |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 Hereditary breast and ovarian cancer syndrome not provided |
Reversed | 0 |
HGVS | NC_000013.10:g.32912907_32912910delAGAA |
CLNSRC | ClinVar |
CLNACC | RCV000031483.6, RCV000044410.4, RCV000213169.1, |