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rs4077515

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(G;G) 0 common in clinvar
Make rs4077515(A;A)
Make rs4077515(A;G)
ReferenceGRCh38 38.1/141
Chromosome9
Position136372044
GeneCARD9
is asnp
is mentioned by
dbSNPrs4077515
dbSNP (classic)rs4077515
ClinGenrs4077515
ebirs4077515
HLIrs4077515
Exacrs4077515
Gnomadrs4077515
Varsomers4077515
LitVarrs4077515
Maprs4077515
PheGenIrs4077515
Biobankrs4077515
1000 genomesrs4077515
hgdprs4077515
ensemblrs4077515
geneviewrs4077515
scholarrs4077515
googlers4077515
pharmgkbrs4077515
gwascentralrs4077515
openSNPrs4077515
23andMers4077515
SNPshotrs4077515
SNPdbers4077515
MSV3drs4077515
GWAS Ctlgrs4077515
GMAF0.3669
Max Magnitude0
? (A;A) (A;G) (G;G) 28


GWAS snp
PMID [PMID 20228799OA-icon.png]
Trait Ulcerative colitis
Title Genome-wide association identifies multiple ulcerative colitis susceptibility loci
Risk Allele C
P-val 5E-8
Odds Ratio 1.14 [NR]
GWAS snp
PMID [PMID 21102463OA-icon.png]
Trait
Title Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci
Risk Allele T
P-val 1E-36
Odds Ratio 1.1800 [1.13-1.22]

[PMID 18439550OA-icon.png] Genetic analysis of innate immunity in Crohn's disease and ulcerative colitis identifies two susceptibility loci harboring CARD9 and IL18RAP.

[PMID 20463747OA-icon.png] Elucidating the chromosome 9 association with AS; CARD9 is a candidate gene.

[PMID 21304977OA-icon.png] An investigation of genome-wide studies reported susceptibility loci for ulcerative colitis shows limited replication in north Indians.

[PMID 5652722OA-icon.png] The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy

GWAS snp
PMID [PMID 22936669]
Trait Crohn's disease
Title A genome-wide association study on a southern European population identifies a new Crohn's disease susceptibility locus at RBX1-EP300.
Risk Allele T
P-val 4E-6
Odds Ratio 1.29 [NR]


[PMID 22957492] Pathway analysis of a genome-wide association study of ileal Crohn's disease.


ClinVar
Risk rs4077515(A;A)
Alt rs4077515(A;A)
Reference Rs4077515(G;G)
Significance Non-pathogenic
Disease Familial Candidiasis not specified
Variation info
Gene CARD9 DNLZ
CLNDBN Familial Candidiasis, Recessive not specified
Reversed 1
HGVS NC_000009.11:g.139266496C>T
CLNSRC
CLNACC RCV000408113.1, RCV000454561.1,



[PMID 31595308] A CARD9 single-nucleotide polymorphism rs4077515 is associated with reduced susceptibility to and severity of primary immune thrombocytopenia.