rs45517214
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 4 | Tuberous sclerosis |
(G;T) | 6.3 | Tuberous Sclerosis Complex |
(T;T) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 2072293 |
Gene | TSC2 |
is a | snp |
is | mentioned by |
dbSNP | rs45517214 |
dbSNP (classic) | rs45517214 |
ClinGen | rs45517214 |
ebi | rs45517214 |
HLI | rs45517214 |
Exac | rs45517214 |
Gnomad | rs45517214 |
Varsome | rs45517214 |
LitVar | rs45517214 |
Map | rs45517214 |
PheGenI | rs45517214 |
Biobank | rs45517214 |
1000 genomes | rs45517214 |
hgdp | rs45517214 |
ensembl | rs45517214 |
geneview | rs45517214 |
scholar | rs45517214 |
rs45517214 | |
pharmgkb | rs45517214 |
gwascentral | rs45517214 |
openSNP | rs45517214 |
23andMe | rs45517214 |
SNPshot | rs45517214 |
SNPdbe | rs45517214 |
MSV3d | rs45517214 |
GWAS Ctlg | rs45517214 |
Max Magnitude | 6.3 |
rs45517214 is a SNP in the TSC2 gene on chromosome 16, associated with tuberous sclerosis in an autosomal dominant manner.[PMID 10069705]
This variant meets the criteria published in 2013 by the ACMG regarding incidental findings in exome or genome sequencing, as a variant that they do recommend informing a patient about.[PMID 23788249]
See also OMIM 191092.0007
ClinVar | |
---|---|
Risk | Rs45517214(G;G) |
Alt | Rs45517214(G;G) |
Reference | Rs45517214(T;T) |
Significance | Pathogenic |
Disease | Tuberous sclerosis 2 Tuberous sclerosis syndrome |
Variation | info |
Gene | TSC2 |
CLNDBN | Tuberous sclerosis 2 Tuberous sclerosis syndrome |
Reversed | 0 |
HGVS | NC_000016.9:g.2122294T>G |
CLNSRC | OMIM Allelic Variant Tuberous sclerosis database (TSC2) UniProtKB (protein) |
CLNACC | RCV000013207.25, RCV000042452.2, |
[PMID 10069705] Novel TSC2 mutation in a patient with pulmonary tuberous sclerosis: lack of loss of heterozygosity in a lung cyst.
[PMID 10570911] Mutational analysis of TSC1 and TSC2 genes in Japanese patients with tuberous sclerosis complex.