rs6028
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(T;T) | 0 | common in clinvar |
Make rs6028(C;C) |
Make rs6028(C;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 169582444 |
Gene | F5 |
is a | snp |
is | mentioned by |
dbSNP | rs6028 |
dbSNP (classic) | rs6028 |
ClinGen | rs6028 |
ebi | rs6028 |
HLI | rs6028 |
Exac | rs6028 |
Gnomad | rs6028 |
Varsome | rs6028 |
LitVar | rs6028 |
Map | rs6028 |
PheGenI | rs6028 |
Biobank | rs6028 |
1000 genomes | rs6028 |
hgdp | rs6028 |
ensembl | rs6028 |
geneview | rs6028 |
scholar | rs6028 |
rs6028 | |
pharmgkb | rs6028 |
gwascentral | rs6028 |
openSNP | rs6028 |
23andMe | rs6028 |
SNPshot | rs6028 |
SNPdbe | rs6028 |
MSV3d | rs6028 |
GWAS Ctlg | rs6028 |
GMAF | 0.2282 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 22703881] |
Trait | |
Title | Genetic Associations for Activated Partial Thromboplastin Time and Prothrombin Time, their Gene Expression Profiles, and Risk of Coronary Artery Disease. |
Risk Allele | C |
P-val | 3E-9 |
Odds Ratio | 0.2260 None |
[PMID 18426996] Relations of inflammatory biomarkers and common genetic variants with arterial stiffness and wave reflection.
[PMID 19404301] Variation in the upstream region of P-Selectin (SELP) is a risk factor for SLE.
ClinVar | |
---|---|
Risk | rs6028(C;C) |
Alt | rs6028(C;C) |
Reference | Rs6028(T;T) |
Significance | Probable-non-pathogenic |
Disease | not specified Thrombophilia Thrombophilia due to activated protein C resistance Factor V deficiency Budd-Chiari syndrome |
Variation | info |
Gene | F5 |
CLNDBN | not specified Thrombophilia Thrombophilia due to activated protein C resistance Factor V deficiency Budd-Chiari syndrome |
Reversed | 0 |
HGVS | NC_000001.10:g.169551682T>C |
CLNSRC | |
CLNACC | RCV000243137.1, RCV000271943.1, RCV000311703.1, RCV000327005.1, RCV000366465.1, |