rs63750049
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;A) | 6 | Lynch syndrome, pathogenic mutation |
(A;A) | 0 | common in clinvar |
(I;I) | 0 |
Make rs63750049(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 7 |
Position | 5989923 |
Gene | PMS2 |
is a | snp |
is | mentioned by |
dbSNP | rs63750049 |
dbSNP (classic) | rs63750049 |
ClinGen | rs63750049 |
ebi | rs63750049 |
HLI | rs63750049 |
Exac | rs63750049 |
Gnomad | rs63750049 |
Varsome | rs63750049 |
LitVar | rs63750049 |
Map | rs63750049 |
PheGenI | rs63750049 |
Biobank | rs63750049 |
1000 genomes | rs63750049 |
hgdp | rs63750049 |
ensembl | rs63750049 |
geneview | rs63750049 |
scholar | rs63750049 |
rs63750049 | |
pharmgkb | rs63750049 |
gwascentral | rs63750049 |
openSNP | rs63750049 |
23andMe | rs63750049 |
SNPshot | rs63750049 |
SNPdbe | rs63750049 |
MSV3d | rs63750049 |
GWAS Ctlg | rs63750049 |
Max Magnitude | 6 |
ClinVar | |
---|---|
Risk | rs63750049(-;-) |
Alt | rs63750049(-;-) |
Reference | Rs63750049(A;A) |
Significance | Pathogenic |
Disease | Hereditary nonpolyposis colorectal cancer type 4 Lynch syndrome not provided |
Variation | info |
Gene | PMS2 |
CLNDBN | Hereditary nonpolyposis colorectal cancer type 4 Lynch syndrome not provided |
Reversed | 1 |
HGVS | NC_000007.13:g.6029554delT |
CLNSRC | OMIM Allelic Variant PMS2 @ LOVD |
CLNACC | RCV000009821.4, RCV000076793.4, RCV000220282.1, |