rs63750490
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;T) | 6 | Lynch syndrome, pathogenic mutation |
Make rs63750490(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 7 |
Position | 5986925 |
Gene | PMS2 |
is a | snp |
is | mentioned by |
dbSNP | rs63750490 |
dbSNP (classic) | rs63750490 |
ClinGen | rs63750490 |
ebi | rs63750490 |
HLI | rs63750490 |
Exac | rs63750490 |
Gnomad | rs63750490 |
Varsome | rs63750490 |
LitVar | rs63750490 |
Map | rs63750490 |
PheGenI | rs63750490 |
Biobank | rs63750490 |
1000 genomes | rs63750490 |
hgdp | rs63750490 |
ensembl | rs63750490 |
geneview | rs63750490 |
scholar | rs63750490 |
rs63750490 | |
pharmgkb | rs63750490 |
gwascentral | rs63750490 |
openSNP | rs63750490 |
23andMe | rs63750490 |
SNPshot | rs63750490 |
SNPdbe | rs63750490 |
MSV3d | rs63750490 |
GWAS Ctlg | rs63750490 |
Max Magnitude | 6 |
ClinVar | |
---|---|
Risk | rs63750490(T;T) |
Alt | rs63750490(T;T) |
Reference | Rs63750490(A;A) |
Significance | Pathogenic |
Disease | Lynch syndrome Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | PMS2 |
CLNDBN | Lynch syndrome Hereditary cancer-predisposing syndrome not provided |
Reversed | 1 |
HGVS | NC_000007.13:g.6026556T>A |
CLNSRC | International Society for Gastrointestinal Hereditary Tumours |
CLNACC | RCV000076831.2, RCV000164595.1, RCV000216236.2, |