rs654128
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common on affy axiom data |
Make rs654128(G;T) |
Make rs654128(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 6 |
Position | 116765215 |
Gene | FAM162B, LOC105377963 |
is a | snp |
is | mentioned by |
dbSNP | rs654128 |
dbSNP (classic) | rs654128 |
ClinGen | rs654128 |
ebi | rs654128 |
HLI | rs654128 |
Exac | rs654128 |
Gnomad | rs654128 |
Varsome | rs654128 |
LitVar | rs654128 |
Map | rs654128 |
PheGenI | rs654128 |
Biobank | rs654128 |
1000 genomes | rs654128 |
hgdp | rs654128 |
ensembl | rs654128 |
geneview | rs654128 |
scholar | rs654128 |
rs654128 | |
pharmgkb | rs654128 |
gwascentral | rs654128 |
openSNP | rs654128 |
23andMe | rs654128 |
SNPshot | rs654128 |
SNPdbe | rs654128 |
MSV3d | rs654128 |
GWAS Ctlg | rs654128 |
GMAF | 0.09871 |
Max Magnitude | 0 |
? | (G;G) (G;T) (T;T) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 21460395![]() |
Trait | |
Title | A genome-wide association study identifies a locus on chromosome 14q21 as a predictor of leukocyte telomere length and as a marker of susceptibility for bladder cancer |
Risk Allele | |
P-val | 0.000003 |
Odds Ratio | 0.1200 [NR] unit increase |
[PMID 23180556] Leukocyte telomere length-related genetic variants in 1p34.2 and 14q21 loci contribute to the risk of esophageal squamous cell carcinoma
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 6
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d