rs683395
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | |
(C;C) | 1.3x risk | |
(C;T) | 1.5x risk | |
(T;T) | 0 | normal |
Reference | GRCh38 38.1/141 |
Chromosome | 3 |
Position | 183152030 |
Gene | LAMP3 |
is a | snp |
is | mentioned by |
dbSNP | rs683395 |
dbSNP (classic) | rs683395 |
ClinGen | rs683395 |
ebi | rs683395 |
HLI | rs683395 |
Exac | rs683395 |
Gnomad | rs683395 |
Varsome | rs683395 |
LitVar | rs683395 |
Map | rs683395 |
PheGenI | rs683395 |
Biobank | rs683395 |
1000 genomes | rs683395 |
hgdp | rs683395 |
ensembl | rs683395 |
geneview | rs683395 |
scholar | rs683395 |
rs683395 | |
pharmgkb | rs683395 |
gwascentral | rs683395 |
openSNP | rs683395 |
23andMe | rs683395 |
SNPshot | rs683395 |
SNPdbe | rs683395 |
MSV3d | rs683395 |
GWAS Ctlg | rs683395 |
GMAF | 0.1175 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
rs683395 has been reported in a large study to be associated with bipolar disorder.
The risk allele (oriented to the dbSNP entry) is (G); the odds ratio associated with heterozygotes is 1.47 (CI 1.26-1.71), and for homozygotes, 1.3 (CI 0.69-2.46). [PMID 17554300]
GWAS | |
---|---|
SNP | rs683395 |
PubMedID | [PMID 17554300] |
Condition | Bipolar disorder |
Gene | NR |
Risk Allele | G |
pValue | 5.00E-006 |
OR | 1.47 |
95% CI | 1.26-1.71 |
[PMID 19308021] Findings from bipolar disorder genome-wide association studies replicate in a Finnish bipolar family-cohort.