rs72549331
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
(G;T) | 1 | likely to be an unaffected carrier of a trimethylaminuria allele |
(T;T) | 2 | trimethylaminuria & related issues; see discussion |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 171114339 |
Gene | FMO3 |
is a | snp |
is | mentioned by |
dbSNP | rs72549331 |
dbSNP (classic) | rs72549331 |
ClinGen | rs72549331 |
ebi | rs72549331 |
HLI | rs72549331 |
Exac | rs72549331 |
Gnomad | rs72549331 |
Varsome | rs72549331 |
LitVar | rs72549331 |
Map | rs72549331 |
PheGenI | rs72549331 |
Biobank | rs72549331 |
1000 genomes | rs72549331 |
hgdp | rs72549331 |
ensembl | rs72549331 |
geneview | rs72549331 |
scholar | rs72549331 |
rs72549331 | |
pharmgkb | rs72549331 |
gwascentral | rs72549331 |
openSNP | rs72549331 |
23andMe | rs72549331 |
SNPshot | rs72549331 |
SNPdbe | rs72549331 |
MSV3d | rs72549331 |
GWAS Ctlg | rs72549331 |
GMAF | 0.0004591 |
Max Magnitude | 2 |
rs72549331, also known as Arg387Leu, is a SNP in the FMO3 gene. The homozygous minor genotype has been reported in a patient with trimethylaminuria.[PMID 10479479]
ClinVar | |
---|---|
Risk | rs72549331(A;A) Rs72549331(T;T) |
Alt | rs72549331(A;A) Rs72549331(T;T) |
Reference | Rs72549331(G;G) |
Significance | Pathogenic |
Disease | not provided Trimethylaminuria |
Variation | info |
Gene | FMO3 |
CLNDBN | not provided Trimethylaminuria |
Reversed | 0 |
HGVS | NC_000001.10:g.171083479G>A; NC_000001.10:g.171083479G>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000489148.1, RCV000017704.30, |