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rs780936696

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;A) 0 common in clinvar
(A;T) 3 Carrier of a Canavan disease mutation
(T;T) 8 Canavan disease (predicted)
ReferenceGRCh38.p2 38.2/144
Chromosome17
Position3481601
GeneASPA, SPATA22
is asnp
is mentioned by
dbSNPrs780936696
dbSNP (classic)rs780936696
ClinGenrs780936696
ebirs780936696
HLIrs780936696
Exacrs780936696
Gnomadrs780936696
Varsomers780936696
LitVarrs780936696
Maprs780936696
PheGenIrs780936696
Biobankrs780936696
1000 genomesrs780936696
hgdprs780936696
ensemblrs780936696
geneviewrs780936696
scholarrs780936696
googlers780936696
pharmgkbrs780936696
gwascentralrs780936696
openSNPrs780936696
23andMers780936696
SNPshotrs780936696
SNPdbers780936696
MSV3drs780936696
GWAS Ctlgrs780936696
Max Magnitude8

ASPA gene variant, known as c.237-2A>T

Note that one source in ClinVar indicates that the minor allele is a pathogenic mutation (for Canavan disease), while another source indicates the minor allele is of uncertain significance.


ClinVar
Risk Rs780936696(T;T)
Alt Rs780936696(T;T)
Reference Rs780936696(A;A)
Significance Other
Disease Spongy degeneration of central nervous system
Variation info
Gene SPATA22 ASPA
CLNDBN Spongy degeneration of central nervous system
Reversed 0
HGVS NC_000017.10:g.3384895A>T
CLNSRC
CLNACC RCV000169526.2,