rs786201005
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 3 | Carrier of an immunodeficiency mutation |
(T;T) | 3 | Causes a lack of ISG15 which in turn causes basal ganglia calcification, auto-inflammation and susceptibility to mycobacterial disease |
Reference | GRCh38.p2 38.2/146 |
Chromosome | 1 |
Position | 1014143 |
Gene | ISG15 |
is a | snp |
is | mentioned by |
dbSNP | rs786201005 |
dbSNP (classic) | rs786201005 |
ClinGen | rs786201005 |
ebi | rs786201005 |
HLI | rs786201005 |
Exac | rs786201005 |
Gnomad | rs786201005 |
Varsome | rs786201005 |
LitVar | rs786201005 |
Map | rs786201005 |
PheGenI | rs786201005 |
Biobank | rs786201005 |
1000 genomes | rs786201005 |
hgdp | rs786201005 |
ensembl | rs786201005 |
geneview | rs786201005 |
scholar | rs786201005 |
rs786201005 | |
pharmgkb | rs786201005 |
gwascentral | rs786201005 |
openSNP | rs786201005 |
23andMe | rs786201005 |
SNPshot | rs786201005 |
SNPdbe | rs786201005 |
MSV3d | rs786201005 |
GWAS Ctlg | rs786201005 |
Max Magnitude | 3 |
ClinVar | |
---|---|
Risk | Rs786201005(T;T) |
Alt | Rs786201005(T;T) |
Reference | Rs786201005(C;C) |
Significance | Pathogenic |
Disease | Immunodeficiency 38 with basal ganglia calcification |
Variation | info |
Gene | ISG15 |
CLNDBN | Immunodeficiency 38 with basal ganglia calcification |
Reversed | 0 |
HGVS | NC_000001.10:g.949523C>T |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000162196.3, |