rs794727152
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 7 | Infantile spasms; early-onset epileptic encephalopathies |
(G;G) | 0 | common in clinvar |
Make rs794727152(A;A) |
Reference | GRCh38.p2 38.2/146 |
Chromosome | 2 |
Position | 165342465 |
Gene | SCN2A |
is a | snp |
is | mentioned by |
dbSNP | rs794727152 |
dbSNP (classic) | rs794727152 |
ClinGen | rs794727152 |
ebi | rs794727152 |
HLI | rs794727152 |
Exac | rs794727152 |
Gnomad | rs794727152 |
Varsome | rs794727152 |
LitVar | rs794727152 |
Map | rs794727152 |
PheGenI | rs794727152 |
Biobank | rs794727152 |
1000 genomes | rs794727152 |
hgdp | rs794727152 |
ensembl | rs794727152 |
geneview | rs794727152 |
scholar | rs794727152 |
rs794727152 | |
pharmgkb | rs794727152 |
gwascentral | rs794727152 |
openSNP | rs794727152 |
23andMe | rs794727152 |
SNPshot | rs794727152 |
SNPdbe | rs794727152 |
MSV3d | rs794727152 |
GWAS Ctlg | rs794727152 |
Max Magnitude | 7 |
rs794727152, also known as c.2558G>A, p.Arg853Gln and R853Q, is a rare variant in the SCN2A gene on chromosome 2.
The rs794727152(A) allele is reported in ClinVar by two sources to be pathogenic for infantile spasms, more specifically, early-onset epileptic encephalopathies.[PMID 23935176]
ClinVar | |
---|---|
Risk | rs794727152(A;A) |
Alt | rs794727152(A;A) |
Reference | Rs794727152(G;G) |
Significance | Pathogenic |
Disease | not provided Early infantile epileptic encephalopathy 11 |
Variation | info |
Gene | SCN2A |
CLNDBN | not provided Early infantile epileptic encephalopathy 11 |
Reversed | 0 |
HGVS | NC_000002.11:g.166198975G>A |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000174944.3, RCV000197677.1, |