rs80338773
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs80338773(C;T) |
| Make rs80338773(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 28402277 |
| Gene | SLC46A1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80338773 |
| dbSNP (classic) | rs80338773 |
| ClinGen | rs80338773 |
| ebi | rs80338773 |
| HLI | rs80338773 |
| Exac | rs80338773 |
| Gnomad | rs80338773 |
| Varsome | rs80338773 |
| LitVar | rs80338773 |
| Map | rs80338773 |
| PheGenI | rs80338773 |
| Biobank | rs80338773 |
| 1000 genomes | rs80338773 |
| hgdp | rs80338773 |
| ensembl | rs80338773 |
| geneview | rs80338773 |
| scholar | rs80338773 |
| rs80338773 | |
| pharmgkb | rs80338773 |
| gwascentral | rs80338773 |
| openSNP | rs80338773 |
| 23andMe | rs80338773 |
| SNPshot | rs80338773 |
| SNPdbe | rs80338773 |
| MSV3d | rs80338773 |
| GWAS Ctlg | rs80338773 |
| Max Magnitude | 0 |
| ClinVar | |
|---|---|
| Risk | rs80338773(T;T) |
| Alt | rs80338773(T;T) |
| Reference | Rs80338773(C;C) |
| Significance | Pathogenic |
| Disease | Congenital defect of folate absorption not provided |
| Variation | info |
| Gene | SLC46A1 |
| CLNDBN | Congenital defect of folate absorption not provided |
| Reversed | 1 |
| HGVS | NC_000017.10:g.26729295G>A |
| CLNSRC | OMIM Allelic Variant UniProtKB (protein) UniProtKB (variants) |
| CLNACC | RCV000000902.3, RCV000059710.1, |
[PMID 17446347
] The spectrum of mutations in the PCFT gene, coding for an intestinal folate transporter, that are the basis for hereditary folate malabsorption.
