rs80356540
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
Make rs80356540(A;G) |
Make rs80356540(G;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 10 |
Position | 100990474 |
Gene | C10orf2, TWNK |
is a | snp |
is | mentioned by |
dbSNP | rs80356540 |
dbSNP (classic) | rs80356540 |
ClinGen | rs80356540 |
ebi | rs80356540 |
HLI | rs80356540 |
Exac | rs80356540 |
Gnomad | rs80356540 |
Varsome | rs80356540 |
LitVar | rs80356540 |
Map | rs80356540 |
PheGenI | rs80356540 |
Biobank | rs80356540 |
1000 genomes | rs80356540 |
hgdp | rs80356540 |
ensembl | rs80356540 |
geneview | rs80356540 |
scholar | rs80356540 |
rs80356540 | |
pharmgkb | rs80356540 |
gwascentral | rs80356540 |
openSNP | rs80356540 |
23andMe | rs80356540 |
SNPshot | rs80356540 |
SNPdbe | rs80356540 |
MSV3d | rs80356540 |
GWAS Ctlg | rs80356540 |
Max Magnitude | 0 |
ClinVar | |
---|---|
Risk | rs80356540(G;G) |
Alt | rs80356540(G;G) |
Reference | Rs80356540(A;A) |
Significance | Pathogenic |
Disease | Mitochondrial DNA depletion syndrome 7 (hepatocerebral type) not provided |
Variation | info |
Gene | C10orf2 |
CLNDBN | Mitochondrial DNA depletion syndrome 7 (hepatocerebral type) not provided |
Reversed | 0 |
HGVS | NC_000010.10:g.102750231A>G |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000020865.5, RCV000199894.3, |
[PMID 16135556] Infantile onset spinocerebellar ataxia is caused by recessive mutations in mitochondrial proteins Twinkle and Twinky.
[PMID 17921179] Recessive Twinkle mutations in early onset encephalopathy with mtDNA depletion.