rs80358695
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
(G;T) | 6 | BRCA2 variant considered pathogenic for breast cancer |
Make rs80358695(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32339003 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80358695 |
dbSNP (classic) | rs80358695 |
ClinGen | rs80358695 |
ebi | rs80358695 |
HLI | rs80358695 |
Exac | rs80358695 |
Gnomad | rs80358695 |
Varsome | rs80358695 |
LitVar | rs80358695 |
Map | rs80358695 |
PheGenI | rs80358695 |
Biobank | rs80358695 |
1000 genomes | rs80358695 |
hgdp | rs80358695 |
ensembl | rs80358695 |
geneview | rs80358695 |
scholar | rs80358695 |
rs80358695 | |
pharmgkb | rs80358695 |
gwascentral | rs80358695 |
openSNP | rs80358695 |
23andMe | rs80358695 |
SNPshot | rs80358695 |
SNPdbe | rs80358695 |
MSV3d | rs80358695 |
GWAS Ctlg | rs80358695 |
Max Magnitude | 6 |
rs80358695, also known as E1550X, c.4648G>T and p.Glu1550Ter, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
The minor allele for this variant has also been found in a BRCA2 compound heterozygote, associated with Fanconi anemia complementation group D1.
ClinVar | |
---|---|
Risk | rs80358695(C;C) rs80358695(T;T) |
Alt | rs80358695(C;C) rs80358695(T;T) |
Reference | Rs80358695(G;G) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Fanconi anemia Hereditary breast and ovarian cancer syndrome |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 Fanconi anemia, complementation group D1 Hereditary breast and ovarian cancer syndrome |
Reversed | 0 |
HGVS | NC_000013.10:g.32913140G>C; NC_000013.10:g.32913140G>T |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000210981.1, RCV000009935.3, RCV000044460.3, RCV000113326.3, |