rs80358979
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;T) | 5 | BRCA2 variant considered pathogenic for breast cancer |
(T;T) | 0 | common in clinvar |
Make rs80358979(C;C) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32356521 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80358979 |
dbSNP (classic) | rs80358979 |
ClinGen | rs80358979 |
ebi | rs80358979 |
HLI | rs80358979 |
Exac | rs80358979 |
Gnomad | rs80358979 |
Varsome | rs80358979 |
LitVar | rs80358979 |
Map | rs80358979 |
PheGenI | rs80358979 |
Biobank | rs80358979 |
1000 genomes | rs80358979 |
hgdp | rs80358979 |
ensembl | rs80358979 |
geneview | rs80358979 |
scholar | rs80358979 |
rs80358979 | |
pharmgkb | rs80358979 |
gwascentral | rs80358979 |
openSNP | rs80358979 |
23andMe | rs80358979 |
SNPshot | rs80358979 |
SNPdbe | rs80358979 |
MSV3d | rs80358979 |
GWAS Ctlg | rs80358979 |
Max Magnitude | 5 |
aka c.7529T>C (p.Leu2510Pro)
Classified as a BRCA2 gene pathogenic mutation for breast cancer based on likelihood cited in ClinVar and in [PMID 29394989]
ClinVar | |
---|---|
Risk | rs80358979(C;C) |
Alt | rs80358979(C;C) |
Reference | Rs80358979(T;T) |
Significance | Pathogenic |
Disease | Fanconi anemia Familial cancer of breast Breast-ovarian cancer not provided |
Variation | info |
Gene | BRCA2 |
CLNDBN | Fanconi anemia, complementation group D1 Familial cancer of breast Breast-ovarian cancer, familial 2 not provided |
Reversed | 0 |
HGVS | NC_000013.10:g.32930658T>C |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000009936.6, RCV000045238.2, RCV000113772.1, RCV000478444.1, |