rs80359507
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;A) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(-;AA) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(AA;AA) | 0 | common in clinvar |
Make rs80359507(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32339705 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359507 |
dbSNP (classic) | rs80359507 |
ClinGen | rs80359507 |
ebi | rs80359507 |
HLI | rs80359507 |
Exac | rs80359507 |
Gnomad | rs80359507 |
Varsome | rs80359507 |
LitVar | rs80359507 |
Map | rs80359507 |
PheGenI | rs80359507 |
Biobank | rs80359507 |
1000 genomes | rs80359507 |
hgdp | rs80359507 |
ensembl | rs80359507 |
geneview | rs80359507 |
scholar | rs80359507 |
rs80359507 | |
pharmgkb | rs80359507 |
gwascentral | rs80359507 |
openSNP | rs80359507 |
23andMe | rs80359507 |
SNPshot | rs80359507 |
SNPdbe | rs80359507 |
MSV3d | rs80359507 |
GWAS Ctlg | rs80359507 |
Max Magnitude | 6 |
rs80359507, also known as 5578delAA, c.5350_5351delAA and p.Asn1784Hisfs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
Note the many different mutations all now lumped by dbSNP under a single rsID; at a minimum, these include delAAA, delAA, delA, dupA and dupAA. Of these 5, all are considered pathogenic except for the first, delAAA, which is of uncertain significance.
23andMe name for c.5351delA: i5009103
ClinVar | |
---|---|
Risk | rs80359507(-;-) |
Alt | rs80359507(-;-) |
Reference | Rs80359507(AA;AA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome not provided Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 Hereditary breast and ovarian cancer syndrome not provided Hereditary cancer-predisposing syndrome |
Reversed | 0 |
HGVS | NC_000013.10:g.32913842_32913843delAA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000031540.9, RCV000044639.5, RCV000074537.8, RCV000131110.3, |