rs80359538
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;CCAA) | 6 | Possible miscall in Ancestry v2d data; otherwise, BRCA2 variant considered pathogenic for breast cancer |
(AACC;AACC) | 0 | common in clinvar |
(CCAA;CCAA) | 0 | common in clinvar |
Make rs80359538(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32340154 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359538 |
dbSNP (classic) | rs80359538 |
ClinGen | rs80359538 |
ebi | rs80359538 |
HLI | rs80359538 |
Exac | rs80359538 |
Gnomad | rs80359538 |
Varsome | rs80359538 |
LitVar | rs80359538 |
Map | rs80359538 |
PheGenI | rs80359538 |
Biobank | rs80359538 |
1000 genomes | rs80359538 |
hgdp | rs80359538 |
ensembl | rs80359538 |
geneview | rs80359538 |
scholar | rs80359538 |
rs80359538 | |
pharmgkb | rs80359538 |
gwascentral | rs80359538 |
openSNP | rs80359538 |
23andMe | rs80359538 |
SNPshot | rs80359538 |
SNPdbe | rs80359538 |
MSV3d | rs80359538 |
GWAS Ctlg | rs80359538 |
Max Magnitude | 6 |
rs80359538, also known as 6027del4, c.5799_5802delCCAA and p.Asn1933_Gln1934?fs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80359538(-;-) |
Alt | rs80359538(-;-) |
Reference | Rs80359538(AACC;AACC) |
Significance | Pathogenic |
Disease | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer Hereditary cancer-predisposing syndrome not provided Familial cancer of breast |
Variation | info |
Gene | BRCA2 |
CLNDBN | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome not provided Familial cancer of breast |
Reversed | 0 |
HGVS | NC_000013.10:g.32914291_32914294delCCAA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000044761.4, RCV000113485.6, RCV000131107.3, RCV000160298.2, RCV000472040.1, |