rs8053188
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in complete genomics |
(C;T) | 0 | Considered benign in ClinVar |
(T;T) | 0 | Considered benign in ClinVar |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 23641204 |
Gene | DCTN5, PALB2 |
is a | snp |
is | mentioned by |
dbSNP | rs8053188 |
dbSNP (classic) | rs8053188 |
ClinGen | rs8053188 |
ebi | rs8053188 |
HLI | rs8053188 |
Exac | rs8053188 |
Gnomad | rs8053188 |
Varsome | rs8053188 |
LitVar | rs8053188 |
Map | rs8053188 |
PheGenI | rs8053188 |
Biobank | rs8053188 |
1000 genomes | rs8053188 |
hgdp | rs8053188 |
ensembl | rs8053188 |
geneview | rs8053188 |
scholar | rs8053188 |
rs8053188 | |
pharmgkb | rs8053188 |
gwascentral | rs8053188 |
openSNP | rs8053188 |
23andMe | rs8053188 |
SNPshot | rs8053188 |
SNPdbe | rs8053188 |
MSV3d | rs8053188 |
GWAS Ctlg | rs8053188 |
GMAF | 0.04316 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
[PMID 19921424] Five common single nucleotide polymorphisms in the PALB2 gene and susceptibility to breast cancer in eastern Chinese population
ClinVar | |
---|---|
Risk | Rs8053188(T;T) |
Alt | Rs8053188(T;T) |
Reference | Rs8053188(C;C) |
Significance | Non-pathogenic |
Disease | Familial cancer of breast not specified Fanconi anemia Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | PALB2 DCTN5 |
CLNDBN | Familial cancer of breast not specified Fanconi anemia Hereditary cancer-predisposing syndrome |
Reversed | 0 |
HGVS | NC_000016.9:g.23652525C>T |
CLNSRC | PALB2 database |
CLNACC | RCV000114446.1, RCV000248074.1, RCV000322920.1, RCV000379880.1, |
[PMID 18302019] Analysis of FANCB and FANCN/PALB2 fanconi anemia genes in BRCA1/2-negative Spanish breast cancer families.
[PMID 18446436] The prevalence of PALB2 germline mutations in BRCA1/BRCA2 negative Chinese women with early onset breast cancer or affected relatives.