rs9289231
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(T;T) | 0 |
Make rs9289231(G;G) |
Make rs9289231(G;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 3 |
Position | 124055231 |
Gene | KALRN |
is a | snp |
is | mentioned by |
dbSNP | rs9289231 |
dbSNP (classic) | rs9289231 |
ClinGen | rs9289231 |
ebi | rs9289231 |
HLI | rs9289231 |
Exac | rs9289231 |
Gnomad | rs9289231 |
Varsome | rs9289231 |
LitVar | rs9289231 |
Map | rs9289231 |
PheGenI | rs9289231 |
Biobank | rs9289231 |
1000 genomes | rs9289231 |
hgdp | rs9289231 |
ensembl | rs9289231 |
geneview | rs9289231 |
scholar | rs9289231 |
rs9289231 | |
pharmgkb | rs9289231 |
gwascentral | rs9289231 |
openSNP | rs9289231 |
23andMe | rs9289231 |
SNPshot | rs9289231 |
SNPdbe | rs9289231 |
MSV3d | rs9289231 |
GWAS Ctlg | rs9289231 |
GMAF | 0.1171 |
Max Magnitude | 0 |
? | (G;G) (G;T) (T;T) | 28 |
---|---|---|
|
In a study of early onset coronary artery disease, rs9289231, the risk allele of this SNP, located in the kalirin KALRN gene, was associated with increased odds (OR 2.1), and also for increased atherosclerosis burden. [PMID 17357071]
[PMID 19706030] Validation Study of Genetic Associations with Coronary Artery Disease on Chromosome 3q13-21 and Potential Effect Modification by Smoking
[PMID 18179892] Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia.
ClinVar | |
---|---|
Risk | rs9289231(G;G) |
Alt | rs9289231(G;G) |
Reference | Rs9289231(T;T) |
Significance | Other |
Disease | Coronary heart disease 5 |
Variation | info |
Gene | KALRN |
CLNDBN | Coronary heart disease 5 |
Reversed | 0 |
HGVS | NC_000003.11:g.123774078T>G |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000005791.2, |
[PMID 30483314] Association between Serum Kalirin Levels and the KALRN gene rs9289231 Polymorphism in Early-Onset Coronary Artery Disease.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 3
- Has genotype
- Has population
- Uses omim
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip 23andMe v5
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip Ancestry v2c
- On chip Ancestry v2d