rs11052552
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 1.4x risk of type-1 diabetes | |
(G;T) | 1.5x risk of type-1 diabetes | |
(T;T) | 0 | normal |
Reference | GRCh38 38.1/141 |
Chromosome | 12 |
Position | 9703362 |
Gene | LOC105369652 |
is a | snp |
is | mentioned by |
dbSNP | rs11052552 |
dbSNP (classic) | rs11052552 |
ClinGen | rs11052552 |
ebi | rs11052552 |
HLI | rs11052552 |
Exac | rs11052552 |
Gnomad | rs11052552 |
Varsome | rs11052552 |
LitVar | rs11052552 |
Map | rs11052552 |
PheGenI | rs11052552 |
Biobank | rs11052552 |
1000 genomes | rs11052552 |
hgdp | rs11052552 |
ensembl | rs11052552 |
geneview | rs11052552 |
scholar | rs11052552 |
rs11052552 | |
pharmgkb | rs11052552 |
gwascentral | rs11052552 |
openSNP | rs11052552 |
23andMe | rs11052552 |
SNPshot | rs11052552 |
SNPdbe | rs11052552 |
MSV3d | rs11052552 |
GWAS Ctlg | rs11052552 |
GMAF | 0.4596 |
Max Magnitude | 0 |
? | (G;G) (G;T) (T;T) | 28 |
---|---|---|
|
rs11052552 has been reported in a large study to be associated with type-1 diabetes.
The risk allele (oriented to the dbSNP entry) is (G); the odds ratio associated with heterozygotes is 1.49 (CI 1.28-1.73), and for homozygotes, 1.43 (CI 1.21-1.69). [PMID 17554300]
GWAS | |
---|---|
SNP | rs11052552 |
PubMedID | [PMID 17554300] |
Condition | Type 1 diabetes |
Gene | NR |
Risk Allele | G |
pValue | 7.00E-007 |
OR | 1.49 |
95% CI | 1.28-1.73 |
[PMID 22496761] Improving Power of Genome-Wide Association Studies with Weighted False Discovery Rate Control and Prioritized Subset Analysis