rs11090865
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 | common in clinvar |
(G;T) | 2.3 | Carrier of a deafness-related modifier variant |
(T;T) | 3 | Modifier variant; some impact in rare cases |
Reference | GRCh38 38.1/141 |
Chromosome | 22 |
Position | 46335792 |
Gene | TRMU |
is a | snp |
is | mentioned by |
dbSNP | rs11090865 |
dbSNP (classic) | rs11090865 |
ClinGen | rs11090865 |
ebi | rs11090865 |
HLI | rs11090865 |
Exac | rs11090865 |
Gnomad | rs11090865 |
Varsome | rs11090865 |
LitVar | rs11090865 |
Map | rs11090865 |
PheGenI | rs11090865 |
Biobank | rs11090865 |
1000 genomes | rs11090865 |
hgdp | rs11090865 |
ensembl | rs11090865 |
geneview | rs11090865 |
scholar | rs11090865 |
rs11090865 | |
pharmgkb | rs11090865 |
gwascentral | rs11090865 |
openSNP | rs11090865 |
23andMe | rs11090865 |
SNPshot | rs11090865 |
SNPdbe | rs11090865 |
MSV3d | rs11090865 |
GWAS Ctlg | rs11090865 |
GMAF | 0.1088 |
Max Magnitude | 3 |
This SNP, also known as c.28G>T, p.Ala10Ser or A10S, represents a variant in the TRMU gene on chromosome 22.
Individuals who are homozygous TRMU A10S (i.e. rs11090865(T;T)) *AND* who also carry the mtDNA A1555G mutation (rs267606617(G)) exhibit prelingual profound deafness.[PMID 16826519]
? | (G;G) (G;T) (T;T) | 28 |
---|---|---|
|
ClinVar | |
---|---|
Risk | Rs11090865(T;T) |
Alt | Rs11090865(T;T) |
Reference | Rs11090865(G;G) |
Significance | Other |
Disease | Deafness not specified Liver failure acute infantile |
Variation | info |
Gene | TRMU |
CLNDBN | Deafness, mitochondrial, modifier of not specified Liver failure acute infantile |
Reversed | 0 |
HGVS | NC_000022.10:g.46731689G>T |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000001353.3, RCV000173461.2, RCV000295210.1, |