rs116987552
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 5 | McArdle disease (also known as glycogen storage disease type V) |
(A;G) | 3 | Carrier of a McArdle disease mutation |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 64759751 |
Gene | PYGM |
is a | snp |
is | mentioned by |
dbSNP | rs116987552 |
dbSNP (classic) | rs116987552 |
ClinGen | rs116987552 |
ebi | rs116987552 |
HLI | rs116987552 |
Exac | rs116987552 |
Gnomad | rs116987552 |
Varsome | rs116987552 |
LitVar | rs116987552 |
Map | rs116987552 |
PheGenI | rs116987552 |
Biobank | rs116987552 |
1000 genomes | rs116987552 |
hgdp | rs116987552 |
ensembl | rs116987552 |
geneview | rs116987552 |
scholar | rs116987552 |
rs116987552 | |
pharmgkb | rs116987552 |
gwascentral | rs116987552 |
openSNP | rs116987552 |
23andMe | rs116987552 |
SNPshot | rs116987552 |
SNPdbe | rs116987552 |
MSV3d | rs116987552 |
GWAS Ctlg | rs116987552 |
GMAF | 0.001377 |
Max Magnitude | 5 |
aka c.148C>T, p.Arg50Ter, R50* and R50X; previously referred to as R49X
This (rare) mutation in the PYGM gene is generally considered to be the most frequent mutation leading to McArdle disease, a recessively inherited condition.
23andMe name: i5012656
ClinVar | |
---|---|
Risk | Rs116987552(A;A) |
Alt | Rs116987552(A;A) |
Reference | Rs116987552(G;G) |
Significance | Pathogenic |
Disease | Glycogen storage disease not provided |
Variation | info |
Gene | PYGM |
CLNDBN | Glycogen storage disease, type V not provided |
Reversed | 0 |
HGVS | NC_000011.9:g.64527223G>A |
CLNSRC | HGMD OMIM Allelic Variant |
CLNACC | RCV000002388.9, RCV000081306.5, |