rs1545985
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | normal risk |
(A;G) | somewhat higher risk for prostate cancer | |
(G;G) | somewhat higher risk for prostate cancer | |
(T;T) | 0 |
Reference | GRCh38 38.1/141 |
Chromosome | 3 |
Position | 45963986 |
Gene | FYCO1 |
is a | snp |
is | mentioned by |
dbSNP | rs1545985 |
dbSNP (classic) | rs1545985 |
ClinGen | rs1545985 |
ebi | rs1545985 |
HLI | rs1545985 |
Exac | rs1545985 |
Gnomad | rs1545985 |
Varsome | rs1545985 |
LitVar | rs1545985 |
Map | rs1545985 |
PheGenI | rs1545985 |
Biobank | rs1545985 |
1000 genomes | rs1545985 |
hgdp | rs1545985 |
ensembl | rs1545985 |
geneview | rs1545985 |
scholar | rs1545985 |
rs1545985 | |
pharmgkb | rs1545985 |
gwascentral | rs1545985 |
openSNP | rs1545985 |
23andMe | rs1545985 |
SNPshot | rs1545985 |
SNPdbe | rs1545985 |
MSV3d | rs1545985 |
GWAS Ctlg | rs1545985 |
GMAF | 0.1919 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
rs1545985 is one of seven SNPs found in a combined study of over 1,000 patients to be associated with increased risk for prostate cancer. The risk allele for this SNP is (G); and while the odds ratio was not specifically reported, the probability of false significance (not permuted though) was given as p=6.6 x 10e-6, using an additive model of risk.[PMID 18073375]