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rs35572355

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;G) 5 Possibly pathogenic for hereditary cancer-predisposing syndrome, but note lack of consensus
(G;G) 0 common in clinvar


Make rs35572355(A;A)
ReferenceGRCh38 38.1/141
Chromosome16
Position68833344
GeneCDH1
is asnp
is mentioned by
dbSNPrs35572355
dbSNP (classic)rs35572355
ClinGenrs35572355
ebirs35572355
HLIrs35572355
Exacrs35572355
Gnomadrs35572355
Varsomers35572355
LitVarrs35572355
Maprs35572355
PheGenIrs35572355
Biobankrs35572355
1000 genomesrs35572355
hgdprs35572355
ensemblrs35572355
geneviewrs35572355
scholarrs35572355
googlers35572355
pharmgkbrs35572355
gwascentralrs35572355
openSNPrs35572355
23andMers35572355
SNPshotrs35572355
SNPdbers35572355
MSV3drs35572355
GWAS Ctlgrs35572355
GMAF0.0009183
Max Magnitude5

aka c.2494G>A (p.Val832Met)

Note that different clinical labs have come to different conclusions about the pathogenicity of this variant. As summarized in this blog post, classifications from eight different labs varied from benign (1 lab) to pathogenic (3 labs) with other labs designating it's clinical significance as uncertain.

OMIM192090
Desc
Variant0017
Relatedalso


ClinVar
Risk rs35572355(A;A) rs35572355(C;C)
Alt rs35572355(A;A) rs35572355(C;C)
Reference Rs35572355(G;G)
Significance Other
Disease Hereditary diffuse gastric cancer Hereditary cancer-predisposing syndrome not specified Neoplasm of stomach
Variation info
Gene CDH1
CLNDBN Hereditary diffuse gastric cancer Hereditary cancer-predisposing syndrome not specified Neoplasm of stomach
Reversed 0
HGVS NC_000016.9:g.68867247G>A
CLNSRC OMIM Allelic Variant UniProtKB (protein)
CLNACC RCV000013033.21, RCV000115856.5, RCV000120506.2, RCV000148456.1,