rs397509139
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 0 | common in clinvar |
(-;ATCT) | 6 | BRCA1 variant considered pathogenic for breast cancer |
Make rs397509139(ATCT;ATCT) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43091018 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs397509139 |
dbSNP (classic) | rs397509139 |
ClinGen | rs397509139 |
ebi | rs397509139 |
HLI | rs397509139 |
Exac | rs397509139 |
Gnomad | rs397509139 |
Varsome | rs397509139 |
LitVar | rs397509139 |
Map | rs397509139 |
PheGenI | rs397509139 |
Biobank | rs397509139 |
1000 genomes | rs397509139 |
hgdp | rs397509139 |
ensembl | rs397509139 |
geneview | rs397509139 |
scholar | rs397509139 |
rs397509139 | |
pharmgkb | rs397509139 |
gwascentral | rs397509139 |
openSNP | rs397509139 |
23andMe | rs397509139 |
SNPshot | rs397509139 |
SNPdbe | rs397509139 |
MSV3d | rs397509139 |
GWAS Ctlg | rs397509139 |
Max Magnitude | 6 |
aka c.3966_3969dupATCT
ClinVar | |
---|---|
Risk | rs397509139(ATCT;ATCT) |
Alt | rs397509139(ATCT;ATCT) |
Reference | Rs397509139(-;-) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 |
Reversed | 1 |
HGVS | NC_000017.10:g.41243036_41243039dupAGAT |
CLNSRC | ClinVar |
CLNACC | RCV000048445.2, RCV000257871.2, |