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rs4349859

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;A) 3 likely to carry two HLA-B27 alleles, possible risk for B27 Syndromes.
(A;G) 3 likely to carry one HLA-B27 allele, possible risk for B27 Syndromes.
(G;G) 0 common in complete genomics
ReferenceGRCh38 38.1/141
Chromosome6
Position31398010
GeneLOC101929072, MICA
is asnp
is mentioned by
dbSNPrs4349859
dbSNP (classic)rs4349859
ClinGenrs4349859
ebirs4349859
HLIrs4349859
Exacrs4349859
Gnomadrs4349859
Varsomers4349859
LitVarrs4349859
Maprs4349859
PheGenIrs4349859
Biobankrs4349859
1000 genomesrs4349859
hgdprs4349859
ensemblrs4349859
geneviewrs4349859
scholarrs4349859
googlers4349859
pharmgkbrs4349859
gwascentralrs4349859
openSNPrs4349859
23andMers4349859
SNPshotrs4349859
SNPdbers4349859
MSV3drs4349859
GWAS Ctlgrs4349859
GMAF0.01791
Max Magnitude3
? (A;A) (A;G) (G;G) 28


GWAS snp
PMID [PMID 21743469OA-icon.png]
Trait
Title Interaction between ERAP1 and HLA-B27 in ankylosing spondylitis implicates peptide handling in the mechanism for HLA-B27 in disease susceptibility.
Risk Allele A
P-val 0
Odds Ratio None None

[PMID 22231927OA-icon.png] Is there a higher genetic load of susceptibility loci in familial ankylosing spondylitis?


[PMID 26070312OA-icon.png] Genetic determinants of cocaine-associated agranulocytosis


[PMID 31902620] High accuracy of HLA-B*27 genotyping by allele-specific real-time polymerase chain reaction in a heterogeneous population compared to flow cytometry and single nucleotide polymorphism detection assays.