rs62625307
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 7 | BRCA1 pathogenic mutation associated with breast cancer |
(G;G) | 0 |
Make rs62625307(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43091933 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs62625307 |
dbSNP (classic) | rs62625307 |
ClinGen | rs62625307 |
ebi | rs62625307 |
HLI | rs62625307 |
Exac | rs62625307 |
Gnomad | rs62625307 |
Varsome | rs62625307 |
LitVar | rs62625307 |
Map | rs62625307 |
PheGenI | rs62625307 |
Biobank | rs62625307 |
1000 genomes | rs62625307 |
hgdp | rs62625307 |
ensembl | rs62625307 |
geneview | rs62625307 |
scholar | rs62625307 |
rs62625307 | |
pharmgkb | rs62625307 |
gwascentral | rs62625307 |
openSNP | rs62625307 |
23andMe | rs62625307 |
SNPshot | rs62625307 |
SNPdbe | rs62625307 |
MSV3d | rs62625307 |
GWAS Ctlg | rs62625307 |
Max Magnitude | 7 |
rs62625307, also known as Q1200X, c.3598C>T, and p.Gln1200Ter, is a SNP in the BRCA1 gene. The rare variant allele is considered pathogenic for breast cancer according to multiple sources in ClinVar.
ClinVar | |
---|---|
Risk | rs62625307(T;T) |
Alt | rs62625307(T;T) |
Reference | Rs62625307(C;C) |
Significance | Pathogenic |
Disease | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer, familial 1 Hereditary cancer-predisposing syndrome not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41243950G>A |
CLNSRC | Inc. |
CLNACC | RCV000048245.5, RCV000077552.7, RCV000131819.4, RCV000159977.3, |