rs721048
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 1.9 | slightly increased prostate cancer risk |
(A;G) | None | |
(G;G) | 0 | normal |
Reference | GRCh38 38.1/141 |
Chromosome | 2 |
Position | 62904596 |
Gene | EHBP1 |
is a | snp |
is | mentioned by |
dbSNP | rs721048 |
dbSNP (classic) | rs721048 |
ClinGen | rs721048 |
ebi | rs721048 |
HLI | rs721048 |
Exac | rs721048 |
Gnomad | rs721048 |
Varsome | rs721048 |
LitVar | rs721048 |
Map | rs721048 |
PheGenI | rs721048 |
Biobank | rs721048 |
1000 genomes | rs721048 |
hgdp | rs721048 |
ensembl | rs721048 |
geneview | rs721048 |
scholar | rs721048 |
rs721048 | |
pharmgkb | rs721048 |
gwascentral | rs721048 |
openSNP | rs721048 |
23andMe | rs721048 |
SNPshot | rs721048 |
SNPdbe | rs721048 |
MSV3d | rs721048 |
GWAS Ctlg | rs721048 |
GMAF | 0.1088 |
Max Magnitude | 1.9 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
[PMID 18264098] shows a significantly stronger association with more aggressive forms of prostate cancer (odds ratios (OR) = 1.15; P = 7.7 x 10(-9)).
GWAS | |
---|---|
SNP | rs721048 |
PubMedID | [PMID 18264098] |
Condition | Prostate cancer |
Gene | EHBP1 |
Risk Allele | A |
pValue | 8.00E-009 |
OR | 1.15 |
95% CI | 1.10-1.21 |
[PMID 19104501] Prostate cancer genomics: towards a new understanding.
[PMID 19318432] Generalizability of associations from prostate cancer genome-wide association studies in multiple populations.
[PMID 19434657] Individual and cumulative effect of prostate cancer risk-associated variants on clinicopathologic variables in 5,895 prostate cancer patients.
[PMID 19549807] Prostate cancer risk associated loci in African Americans.
[PMID 19567509] Genetic variants and prostate cancer risk: candidate replication and exploration of viral restriction genes.
[PMID 20039378] Estimation of genotype relative risks from pedigree data by retrospective likelihoods.
[PMID 21390317] Characterizing associations and SNP-environment interactions for GWAS-identified prostate cancer risk markers--results from BPC3.
[PMID 23405784] [Susceptibility to prostate cancer in Han Chinese: single nucleotide polymorphism analysis of 1 667 cases]
ClinVar | |
---|---|
Risk | Rs721048(A;A) |
Alt | Rs721048(A;A) |
Reference | Rs721048(G;G) |
Significance | Pathogenic |
Disease | Prostate cancer |
Variation | info |
Gene | EHBP1 |
CLNDBN | Prostate cancer, hereditary, 12 |
Reversed | 0 |
HGVS | NC_000002.11:g.63131731G>A |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000001429.2, |
[PMID 26185455] Association between EHBP1 rs721048(A>G) polymorphism and prostate cancer susceptibility: a meta-analysis of 17 studies involving 150,678 subjects
[PMID 32295536] Association study between common variations in some candidate genes and prostate adenocarcinoma predisposition through multi-stage approach in Iranian population.