rs80358345
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;CTG) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(CTG;CTG) | 0 | common in clinvar |
Make rs80358345(-;-) |
Make rs80358345(-;GCT) |
Make rs80358345(GCT;GCT) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 17 |
Position | 43063947 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80358345 |
dbSNP (classic) | rs80358345 |
ClinGen | rs80358345 |
ebi | rs80358345 |
HLI | rs80358345 |
Exac | rs80358345 |
Gnomad | rs80358345 |
Varsome | rs80358345 |
LitVar | rs80358345 |
Map | rs80358345 |
PheGenI | rs80358345 |
Biobank | rs80358345 |
1000 genomes | rs80358345 |
hgdp | rs80358345 |
ensembl | rs80358345 |
geneview | rs80358345 |
scholar | rs80358345 |
rs80358345 | |
pharmgkb | rs80358345 |
gwascentral | rs80358345 |
openSNP | rs80358345 |
23andMe | rs80358345 |
SNPshot | rs80358345 |
SNPdbe | rs80358345 |
MSV3d | rs80358345 |
GWAS Ctlg | rs80358345 |
Merged from | Rs397509225 |
Max Magnitude | 6 |
BRCA1, c.5078_5080delCTG (p.Ala1693del)
ClinVar | |
---|---|
Risk | Rs80358345(CTG;CTG) rs80358345(-;-) |
Alt | Rs80358345(CTG;CTG) rs80358345(-;-) |
Reference | rs80358345(GCT;GCT) |
Significance | Other |
Disease | Familial cancer of breast Breast-ovarian cancer Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 Hereditary cancer-predisposing syndrome not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41215963_41215965delCAG |
CLNSRC | |
CLNACC | RCV000048779.2, RCV000083215.3, RCV000166817.1, RCV000237025.1, |