rs80359484
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;ATGT) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(-;TGTA) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(ATGT;ATGT) | 0 | common in clinvar |
(TATG;TATG) | 0 | common in clinvar |
Make rs80359484(-;-) |
Reference | GRCh38 38.1/142 |
Chromosome | 13 |
Position | 32339484 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359484 |
dbSNP (classic) | rs80359484 |
ClinGen | rs80359484 |
ebi | rs80359484 |
HLI | rs80359484 |
Exac | rs80359484 |
Gnomad | rs80359484 |
Varsome | rs80359484 |
LitVar | rs80359484 |
Map | rs80359484 |
PheGenI | rs80359484 |
Biobank | rs80359484 |
1000 genomes | rs80359484 |
hgdp | rs80359484 |
ensembl | rs80359484 |
geneview | rs80359484 |
scholar | rs80359484 |
rs80359484 | |
pharmgkb | rs80359484 |
gwascentral | rs80359484 |
openSNP | rs80359484 |
23andMe | rs80359484 |
SNPshot | rs80359484 |
SNPdbe | rs80359484 |
MSV3d | rs80359484 |
GWAS Ctlg | rs80359484 |
Merged from | Rs760558178, Rs80359485 |
Max Magnitude | 6 |
rs80359484, also known as c.5130_5133delTGTA, 5357del4, c.5129_5132delATGT and p.Tyr1710_Val1711?fs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80359484(-;-) Rs80359484(TATG;TATG) rs80359484(TGTA;TGTA) |
Alt | rs80359484(-;-) Rs80359484(TATG;TATG) rs80359484(TGTA;TGTA) |
Reference | Rs80359484(ATGT;ATGT) |
Significance | Pathogenic |
Disease | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer Hereditary cancer-predisposing syndrome Breast-ovarian cancer not provided |
Variation | info |
Gene | BRCA2 |
CLNDBN | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome Breast-ovarian cancer, familial 1 not provided |
Reversed | 0 |
HGVS | NC_000013.10:g.32913622_32913625delTGTA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000044563.3, RCV000077345.7, RCV000131075.3, RCV000210164.1, RCV000215028.2, |