rs80359485
From SNPedia
Merged into | rs80359484 |
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;TGTA) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(TATG;TATG) | 0 | common in clinvar |
(TGTA;TGTA) | 0 | common in clinvar |
Make rs80359485(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32339485 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359485 |
dbSNP (classic) | rs80359485 |
ClinGen | rs80359485 |
ebi | rs80359485 |
HLI | rs80359485 |
Exac | rs80359485 |
Gnomad | rs80359485 |
Varsome | rs80359485 |
LitVar | rs80359485 |
Map | rs80359485 |
PheGenI | rs80359485 |
Biobank | rs80359485 |
1000 genomes | rs80359485 |
hgdp | rs80359485 |
ensembl | rs80359485 |
geneview | rs80359485 |
scholar | rs80359485 |
rs80359485 | |
pharmgkb | rs80359485 |
gwascentral | rs80359485 |
openSNP | rs80359485 |
23andMe | rs80359485 |
SNPshot | rs80359485 |
SNPdbe | rs80359485 |
MSV3d | rs80359485 |
GWAS Ctlg | rs80359485 |
Status | Merged into rs80359484 |
Max Magnitude | 6 |
rs80359485, also known as 5358del4, c.5130_5133delTGTA and p.Tyr1710_Val1711?fs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs80359485(TATG;TATG) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer Hereditary cancer-predisposing syndrome Breast-ovarian cancer not provided |
Variation | info |
Gene | BRCA2 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome Breast-ovarian cancer, familial 1 not provided |
Reversed | 0 |
HGVS | NC_000013.10:g.32913622_32913625delTGTA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000044563.2, RCV000077345.6, RCV000131075.3, RCV000210164.1, RCV000215028.2, |