rs887391
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 1.5 | Lower prostate cancer risk? |
| Make rs887391(C;T) |
| Make rs887391(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 19 |
| Position | 41479716 |
| Gene | PCAT19 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs887391 |
| dbSNP (classic) | rs887391 |
| ClinGen | rs887391 |
| ebi | rs887391 |
| HLI | rs887391 |
| Exac | rs887391 |
| Gnomad | rs887391 |
| Varsome | rs887391 |
| LitVar | rs887391 |
| Map | rs887391 |
| PheGenI | rs887391 |
| Biobank | rs887391 |
| 1000 genomes | rs887391 |
| hgdp | rs887391 |
| ensembl | rs887391 |
| geneview | rs887391 |
| scholar | rs887391 |
| rs887391 | |
| pharmgkb | rs887391 |
| gwascentral | rs887391 |
| openSNP | rs887391 |
| 23andMe | rs887391 |
| SNPshot | rs887391 |
| SNPdbe | rs887391 |
| MSV3d | rs887391 |
| GWAS Ctlg | rs887391 |
| GMAF | 0.348 |
| Max Magnitude | 1.5 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
[PMID 19318570
] rs887391 was the most strongly associated SNP in the 19q13 region, which was a region highly associated with prostate cancer (p=9.4 x 10(-4)) based on two large studies.
[PMID 19434657] Individual and cumulative effect of prostate cancer risk-associated variants on clinicopathologic variables in 5,895 prostate cancer patients.
[PMID 19549807] Prostate cancer risk associated loci in African Americans.
[PMID 30033362] Risk SNP-Mediated Promoter-Enhancer Switching Drives Prostate Cancer through lncRNA PCAT19.
