rs80357868
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;GTCT) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(GTCT;GTCT) | 0 | Normal |
(TGTC;TGTC) | 0 | common/normal |
Make rs80357868(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43091772 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357868 |
dbSNP (classic) | rs80357868 |
ClinGen | rs80357868 |
ebi | rs80357868 |
HLI | rs80357868 |
Exac | rs80357868 |
Gnomad | rs80357868 |
Varsome | rs80357868 |
LitVar | rs80357868 |
Map | rs80357868 |
PheGenI | rs80357868 |
Biobank | rs80357868 |
1000 genomes | rs80357868 |
hgdp | rs80357868 |
ensembl | rs80357868 |
geneview | rs80357868 |
scholar | rs80357868 |
rs80357868 | |
pharmgkb | rs80357868 |
gwascentral | rs80357868 |
openSNP | rs80357868 |
23andMe | rs80357868 |
SNPshot | rs80357868 |
SNPdbe | rs80357868 |
MSV3d | rs80357868 |
GWAS Ctlg | rs80357868 |
Merged from | Rs80357963 |
Max Magnitude | 6 |
rs80357868, also known as 3875del4, c.3756_3759delGTCT and p.Leu1252_Ser1253?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | Rs80357868(TGTC;TGTC) rs80357868(-;-) |
Alt | Rs80357868(TGTC;TGTC) rs80357868(-;-) |
Reference | Rs80357868(GTCT;GTCT) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome Familial cancer of breast |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome Familial cancer of breast |
Reversed | 1 |
HGVS | NC_000017.10:g.41243789_41243792delAGAC |
CLNSRC | Breast Cancer Information Core (BRCA1) OMIM Allelic Variant |
CLNACC | RCV000019242.16, RCV000048314.6, RCV000131810.4, RCV000167859.5, RCV000239051.2, |