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rs2967605

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(G;G) 0
Make rs2967605(A;A)
Make rs2967605(A;G)
ReferenceGRCh38 38.1/141
Chromosome19
Position8404854
GeneRAB11B
is asnp
is mentioned by
dbSNPrs2967605
ebirs2967605
HLIrs2967605
Exacrs2967605
Varsomers2967605
Maprs2967605
PheGenIrs2967605
hapmaprs2967605
1000 genomesrs2967605
hgdprs2967605
ensemblrs2967605
gopubmedrs2967605
geneviewrs2967605
scholarrs2967605
googlers2967605
pharmgkbrs2967605
gwascentralrs2967605
openSNPrs2967605
23andMers2967605
23andMe allrs2967605
SNP Nexus

SNPshotrs2967605
SNPdbers2967605
MSV3drs2967605
GWAS Ctlgrs2967605
GMAF0.3085
Max Magnitude0
? (A;A) (A;G) (G;G) 28
per the 23andMe blog, the minor allele of this SNP (T) was associated with decreased HDL cholesterol
SNP Rarer allele LDL HDL TG
rs6544713 T +
rs2650000 A +
rs471364 C -
rs1800961 T -
rs7679 C - +
rs2967605 T -
rs2409722 T -
rs10903129 A - - -
rs6756629 A - + -
rs12670798 C + + +
rs7395662 A - + +
rs174570 T - - +
rs2271293 A - + -
rs2624265 C +
rs2167079 T +
rs9891572 T +
rs4844614 T +
rs5031002 G +
GWAS snp
PMID [PMID 19060906OA-icon.png]
Trait HDL cholesterol
Title Common variants at 30 loci contribute to polygenic dyslipidemia
Risk Allele T
P-val 1E-8
Odds Ratio 0.12 [0.04-0.20] SD decrease


[PMID 19951432OA-icon.png] Analysis of recently identified dyslipidemia alleles reveals two loci that contribute to risk for carotid artery disease.

[PMID 20160193OA-icon.png] Investigation of variants identified in caucasian genome-wide association studies for plasma high-density lipoprotein cholesterol and triglycerides levels in Mexican dyslipidemic study samples.

[PMID 20385826OA-icon.png] Genome-wide association study of advanced age-related macular degeneration identifies a role of the hepatic lipase gene (LIPC).


GET Evidence
rs2967605
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.226562
summary