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rs9891572

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(C;C) 0
(T;T) Increased HDL
Make rs9891572(C;T)
ReferenceGRCh38 38.1/141
Chromosome17
Position2525214
is asnp
is mentioned by
dbSNPrs9891572
ebirs9891572
HLIrs9891572
Exacrs9891572
Varsomers9891572
Maprs9891572
PheGenIrs9891572
hapmaprs9891572
1000 genomesrs9891572
hgdprs9891572
ensemblrs9891572
gopubmedrs9891572
geneviewrs9891572
scholarrs9891572
googlers9891572
pharmgkbrs9891572
gwascentralrs9891572
openSNPrs9891572
23andMers9891572
23andMe allrs9891572
SNP Nexus

SNPshotrs9891572
SNPdbers9891572
MSV3drs9891572
GWAS Ctlgrs9891572
GMAF0.2029
Max Magnitude0
? (C;C) (C;T) (T;T) 28
per the 23andMe blog, the minor allele of this SNP (T) was associated with increased HDL cholesterol
SNP Rarer allele LDL HDL TG
rs6544713 T +
rs2650000 A +
rs471364 C -
rs1800961 T -
rs7679 C - +
rs2967605 T -
rs2409722 T -
rs10903129 A - - -
rs6756629 A - + -
rs12670798 C + + +
rs7395662 A - + +
rs174570 T - - +
rs2271293 A - + -
rs2624265 C +
rs2167079 T +
rs9891572 T +
rs4844614 T +
rs5031002 G +
GWAS snp
PMID [PMID 19060910OA-icon.png]
Trait HDL cholesterol
Title Genome-wide association analysis of metabolic traits in a birth cohort from a founder population
Risk Allele A
P-val 2E-7
Odds Ratio 0.05 [0.048-0.051] mmol/l increase



GET Evidence
rs9891572
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.28125
summary